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Assessment of Biological Properties of Bone Marrow Mesenchymal Stromal Cell by Ex-Vivo Expansion and Differentiation

Thesis Info

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Author

Satti, Humayoon Shafique

Supervisor

Salman A Malik

Program

PhD

Institute

Quaid-I-Azam University

City

Islamabad

Province

Islamabad.

Country

Pakistan

Thesis Completing Year

2017

Thesis Completion Status

Completed

Subject

Biochemistry

Language

English

Link

http://prr.hec.gov.pk/jspui/bitstream/123456789/9799/1/Humayoon%20Shafique%20Satti_Biochem_2017_QAU_Main%20part.pdf

Added

2021-02-17 19:49:13

Modified

2024-03-24 20:25:49

ARI ID

1676725537526

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Mesenchymal stromal cells (MSCs) represent a rare population of multipotent stem cells found in many adult tissues. In bone marrow MSCs support haematopoiesis by providing marrow stroma. MSCs have recently emerged as an exciting candidate for cellular therapy due to their hypoimmunogenic properties and ability to differentiate into different tissue types. With the intent of optimizing large-scale expansion of MSCs for clinical use, we compared different culturing conditions for their ability to support growth and proliferation of bone marrow MSCs (BM-MSCs). We evaluated cells cultured in Alpha Modified Eagle Medium (αMEM), Dulbecco’s modified Eagle medium (DMEM) in the presence of either 10% fetal bovine serum (10% FBS), 10% pooled human platelet lysate (10% pHPL) or commercial serum-free formulation (StemPRO® MSC SFM). We concluded that supplementing growth medium with pHPL resulted in superior cell yield than fetal bovine serum (FBS) and comparable to commercial serum-free formulation. Study II was a phase-I human clinical trial, establishing safety of autologous BM-MSC transplantation in nine spinal cord injury patients. For this ex vivo expanded MSCs were injected intrathecally after premedication. All of our patients tolerated the procedure well and no complication was observed during a median follow up of 644 days. Some of the patients with sub-acute disease reported subjective improvement in sensory and neurological functions. Lastly we carried out a phase-I/II trial of MSCs in allogeneic use as a treatment option in treating steroid-resistant graft versus host disease (GVHD). GVHD is a life threatening complication of allogeneic stem cell xii transplantation and only a fraction of patients are cured through steroids. Those who fail to respond to steroid have a very poor prognosis. The patients received third party BM MSCs as their bone marrow MSCs were failing to cope with the immunemediated tissue destruction by donor T cells. A total of 33 MSC infusions were given to 10 patients suffering from acute GVHD (n=3), chronic GVHD (n=5) and overlap syndrome (n=2). Eight out of ten patients are alive after a median follow up of 11 months with five having sustained CR. Three patients with partial response received further doses to sustain response. One of them died of lung infection while others are still alive. One out of the two non-responding patients died after 17 days of MSC therapy due to advanced liver GVHD while the other is having stable disease course. The overall and disease-free survival was 80% and 50% respectively. The patients developed no complication or toxicity related to MSC infusion. Luminex analysis revealed a modest drop after MSC infusion in pro-inflammatory cytokines like IFNγ, TNFα, IL-1β, IL-2, IL-4, IL-6, IL-17A and IL-17F, whereas serum IL-10 levels were slightly raised. Overall a total of 57 preparations of cultured stem cells were made which were transplanted via I.V. or I.T. route with no adverse event or serious complication to report. Therefore it is concluded that MSCs can be safely given in both autologous as well as allogeneic setting as cellular therapy in selected clinical situations. This initial data on safety and efficacy calls for taking these clinical trials into advanced phase with more detailed account of efficacy measures and addition of placebo groups.
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مولوی محمدبہادر خاں(نواب بہادر یارجنگ)

مولوی محمد بہادر خاں
(سابق نواب بہادر یارجنگ)
افسوس کہ گذشتہ مہینہ کی ۲۴؍ تاریخ کو مولوی محمد بہادر خاں (سابق نواب بہادر یار جنگ) نے حرکت قلب بند ہوجانے سے دفعتہ انتقال کیا، ان کی ناگہانی وفات نہ صرف حیدرآباد بلکہ ہندوستان کے تمام مسلمانوں کے لیے اندوہناک سانحہ ہے، مرحوم حیدرآباد کے ایک قدیم و ممتاز جاگیردار خانوادہ کے رکن، مخلص، دردمند اور علمی مسلمان، زبان آور خطیب، ریاست کے سچے وفادار، مسلمانوں کے غمگسار اور عام اہل ملک کے ہمدرد وبہی خواہ تھے، حیدرآباد کی ہر مفید اسلامی تحریک میں ان کا دست اعانت شامل رہتا تھا، وہ مجلس اتحاد المسلمین کے روحِ رواں اور آل انڈیا ریاستی مسلم لیگ کے بانی اور صدر تھے، ابھی کل ۴۱ سال کی عمر تھی جو قومی زندگی کے اعتبار سے بالکل نوجوانی کی عمر ہے، اس عمر میں مرحوم نے حیدرآباد کے مسلمانوں کی جو گوناگوں خدمات انجام دیں وہ کبھی فراموش نہ ہوں گی، اور اہل دکن کو مدتوں ان کا بدل نہ مل سکے گا، ملک و قوم کی خدمت کی خاطر انہوں نے اپنا خطاب اور جاگیرتک واپس کردی تھی، ان کی ذات سے بڑی توقعات تھیں،لیکن افسوس ان کی جوانمرگی سے اہل دکن کو ان کی صلاحیتوں اور خدمات سے فائدہ اٹھانے کا زیادہ موقع نہ مل سکا، اﷲ تعالیٰ اس مخلص خادم قوم کو اپنی رحمت و مغفرت کے انعام سے سرفراز فرمائے۔ (شاہ معین الدین ندوی، جولائی ۱۹۴۴ء)
اگست ۱۹۴۴ء
ایک بہادر مسلمان کی موت
چار پانچ ہفتے ہوئے میں ایک گاؤں میں تھا کہ دفعتہ ایک صاحب نے ایک انگریزی اخبار کے حوالہ سے نواب بہادر یار جنگ کی اچانک موت کی اطلاع دی، موت ہر وقت آتی ہے، اور ہر وقت آسکتی ہے، تاہم جن کے مرنے کو دل نہیں چاہتا، ان کے مرنے کی خبر کا یقین...

Persecution of Press in Sindh: Case Study of Al-Waheed and Watan Newspapers during Political Movements, 1920-22

The purpose of this research was to study the persecution of press in Sindh during the currency of Pan-Indian political movements known as Khilafat and Non-Cooperation Movements, during 1920-22. In this regard the case study of two popular newspapers, Al-Waheed and Watan, were conducted to understand the mechanism of monitoring and controlling the newspapers in Sindh by the colonial rulers. The study explores the political landscape of Sindh in particular and India in general during those turbulent times as well as examines the state of journalism in the province at that time. With the help of the case study of two popular newspapers, the study highlights the mechanism adopted by the colonial government for monitoring and controlling the press in Sindh. In this regard the archival official records as well as translations of the critical articles published in those newspapers were accessed at the India Office Records (IOR) section of British Library, London. The methodology adopted for the current study mainly comprised historical, analytical and content analysis. The study concludes that the press in Sindh faced severe hardships at the hands of the British government through a coercive mechanism with active involvement and concurrence of all the capitals of Sindh’s governance, i.e. Karachi, Bombay, Delhi and London. The study is first of its kind that highlights the role played and sacrifices rendered by press in Sindh for the freedom of press during colonial rule in 192022. ______

Molecular Characterization of Microorganisms to Detoxify Mercury Pollutants and Their Role in Enhancing Plant Growth

Mercury pollution is a worldwide problem due to its toxicity to both human and animals. The level of mercury pollution in the environment is being increased day by day due to anthropogenic sources and activities like the discharge of industrial effluent from chlor-alkali industries, mining of metal and incineration of coal (Steenhuisen and Wilson, 2015). It is obvious that both forms of mercury (inorganic and organic) cause cytotoxic and neurotoxic effects to humans and animals. In plants, it poses adverse impacts at the cellular and subcellular level and their development. Therefore, there is an urgent need to realize the Hg-induced toxicity in humans and as well as in plants and its harmful effects by the consumption of contaminated nutrition. In this study, mercury resistant bacterial isolates were isolated from wastewater and heavy metal polluted soils collected close to tanneries of district Kasur, Itehad chemicals limited (pvt), Kala Shah Kaku, district Sheikhupura and Rohi-Nala, district Lahore, Pakistan. Eight out of 120 bacterial strains were screened out on the basis of nitrogen fixing ability, high level of Hg resistance (10-60μg/ml), H2S production and indole-3-acetic acid (IAA) production (4-40μg mL-1). Biochemical characterization, short sequence repeats (SSR) fingerprinting, 16S ribotyping and phylogenetic analysis characterized the selected isolates as Bacillus sp. AZ-1 (KT270477), Bacillus cereus AZ-2 (KT270478), Bacillus cereus AZ-3 (KT270479), Bacillus thuringiensis AZ-5 (KJ675627) Enterobacter sp. AZ-15 (KU558920), Salmonella enterica Z-A14 (KJ728670), Enterobacter cloacae Z-A15 (KJ728671), Pseudomonas putida Z-A22 (KJ728678) and Enterobacter asburiae Z-A20 (KJ728676). Phylogenetic relationship on the basis of merA and merB nucleotide sequence confirmed 51-100% homology with the corresponding region of the merA and merB gene of already reported mercury resistant Gram positive bacteria. Restriction fragment length polymorphism (RFLP) analysis was applied to the amplification products of 16S rRNA, merA and merB genes (≈ 1.5, 1.3 and 0.5 kb) and specific restriction patterns were obtained after treatment with endonucleases EcoR1, Taq1, HinF1 and HaeIII. M A small scale reservoir containing Luria Bertani (LB) medium supplemented with 20 μg mL-1 and industrial effluent with same concentration of mercury (Hg+2), were designed to check the detoxification ability of selected isolates. It was found that 76% to 83% of mercury was detoxified by Bacillus spp. Scanning electron microscopic (SEM) analysis confirmed the deposition of HgS on the surface of bacterial cell membranes. Mercury resistant bacteria were immobilized in sodium alginate and checked for their capability to detoxify mercury from industrial effluent. Furthermore, Hg-resistant bacterial cells were grown in LB medium and genomic DNA was extracted by commercially available kit. The merF and merE genes (both are involved in Hg+2 transportation through bacterial cell membrane) were amplified by PCR from genomic DNA by using forward and reverse primers. In case of merE gene, the designed primers containined the designed restriction sites of restriction endonuclease enzymes, SacI and HindIII, respectively. The primers were designed to introduce a SacI site at the start of the mer genes and a HindIII site at the end. The PCR product was digested with SacI and HindIII and ligated into similarly digested pHLV vector. A thrombin cleavage site was inserted into pHLMerE before merE gene sequence due to the presence of methionine genetic codons in merE gene sequence. In case of merF gene, the designed primers containined the designed restriction endonuclease enzymes, Xhol and Sphl sites respectively. The recombinant plasmids HistagtrpΔLE- thrombin site-merE (pHLMerE vector) and KSI-MerFm-Histag (pET31b+ vector) where cysteine residues of MerFwt were mutated with serine in MerFm by site directed mutagenesis, were transformed into competent DH5α E. coli cells. Successful transformants were screened by colony PCR using same primers. The DNA sequence was confirmed by the dideoxy sequencing method. For both genes, the constructed both supercoiled plasmids were isolated from the DH5α strain and retransformed into C43(DE3) E. coli over expressed cells which grow well in the minimal medium used for isotopic labeling. The expression of merFwt (wild type) and merFm (mutated/modified) was obtained in LB, minimal media and isotopically labeled M9 medium. Expression of the fusion protein was induced by adding IPTG. The inclusion bodies containing the fusion protein were separated by centrifugation and then solubilized in the binding buffer. Native MerE and Summary xi MerF proteins were purified by FPLC. The polypeptide was monitored on each step by SDSPAGE. Samples (MerFm protein) for 1H-15N 2D HSQC (Heteronuclear Single-Quantum Correlation) experiment were prepared by resolublizing lypholized protein in NMR buffer. Hydrogen-deuterium fractionation experiment was done with different fractions of D2O. The number, placement and symmetry of peaks of HSQC NMR spectra confirmed the structural MerFm. Moreover, Hg-resistant bacteria were checked for their abilities of nitrogen fixation and phosphate and potassium solubilization qualitatively. IAA produced by selected bacteria was confirmed qualitatively and quantitatively by colorimetric method, TLC, HPLC and GC-MS analysis. Finally, mercury detoxification and IAA producing bacteria were inoculated in mercury amended soil which resulted significance increases in seed germination, shoot length, root length and shoot fresh weight, root fresh weight, number of pods per plant, number of seeds and weight of seeds respectively of chickpea (Cicer arietinum L.) in pot experiments. The bacterial consortium of Hg-resistant and IAA producing bacteria was also inoculated in non-mercury amended soil and the significant increase in yield of wheat (Triticum aestivum L.) and masoor (Lens culinaris L.) was observed in fields. In conclusion, selected bacteria used in this study as a consortium A7(Bacillus sp. AZ-1, Pseudomonas putida Z-A22 and Enterobacter cloacae Z-A15), may be used as an excellent biofertilizer for decreasing mercury pollution and enhancing plant growth in mercury contaminated soil to make a sustainable agricultural land.