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Home > Characterization of Mange Mites and Dermatophytes in Domestic Animals of District Chitral

Characterization of Mange Mites and Dermatophytes in Domestic Animals of District Chitral

Thesis Info

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Author

Hameed, Khalid

Program

PhD

Institute

Pir Mehr Ali Shah Arid Agriculture University

City

Rawalpindi

Province

Punjab

Country

Pakistan

Thesis Completing Year

2017

Thesis Completion Status

Completed

Subject

Natural Sciences

Language

English

Link

http://prr.hec.gov.pk/jspui/bitstream/123456789/7885/1/PhD%20Thesis%20Single%20file.pdf

Added

2021-02-17 19:49:13

Modified

2024-03-24 20:25:49

ARI ID

1676725692027

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Mange mites and dermatophytes (commonly referred to as ringworm) are major problems in veterinary medicine. In Pakistan, mange infestation is reported in domestic animals at lower elevations but higher altitudes were not explored previously, while in case of animal dermatophytosis data is lacking throughout the country. Therefore, the present study was designed to characterize mange mites and dermatophytes in domestic animals of district Chitral. Five villages (Kuju, Kaghozi, Mori, Baleem and Sorlaspur) of district Chitral were surveyed during summer (June-July 2012) and winter (December 2012-January 2013) for collection of data and skin scrapings. The mange was diagnosed from skin scrapings by microscopic examination of mites. In total, 6007 animals (2753 sheep, 2033 goats, 1087 cattle and 134 dogs) were investigated during the surveys, among them 55 animals (44 sheep (1.59%), 7 goats (0.34%) and 4 dogs (2.98%)) were diagnosed with mange. Psoroptes ovis (sheep) and Sarcoptes scabiei (sheep, goats and dogs) were the two species of mites identified in microscopy from skin scrapings. The risk factor analysis was carried out separately for livestock species (sheep/goats) and dogs through Chi-square. In Kaghuzi and Sorlaspur less infection was observed as compared to other villages (p<0.05). The infection was higher in sheep than goats, and less than one year age group was more susceptible for mange (p<0.05). A clear trend of higher infection in winter and lower in summer was recorded (p<0.05). Gender, herd size, and herd composition were not significant risk factors for mange (p>0.05). The molecular characterization of Sarcoptes scabiei was carried out by using nine microsatellite markers viz, Sarm 33, 35, 36, 37, 38, 40, 41, 44 and 45 specific to Sarcoptes scabiei. These markers were used to genotype xix individual mites from different host species. Sarcoptes mites from dog and lynx of district Chitral, Pakistan were jointly analyzed with mites collected from different hosts during previous studies from six different countries. Eight private alleles were detected in Sarcoptes mites from dogs and one private allele was detected from mites derived from lynx of district Chitral, Pakistan. The Bayesian cluster analysis in STRUCTURE software proposed five populations of Sarcoptes scabiei from studied mites. The results showed the existence of distinct dog and lynx derived Sarcoptes scabiei populations from district Chitral, Pakistan. The study demonstrated high host specificity in Sarcoptes mites and lack of gene flow between mites from different hosts. In order to characterize dermatophytes skin scrapings were analyzed by microscopy and real-time PCR. At microscopy, samples from 18 cows (1.66%), 4 goats (0.20%) and 3 sheep (0.11%) were positive for fungal elements consistent with Trichophyton verrucosum. Real-Time PCR confirmed the results of microscopy that Trichophyton verrucosum being the only dermatophyte involved. The prevalence was lower in summer as compared to winter (p value<0.05). The infection was more prevalent in young animals (< 1year) and mix herds (p>0.05). There was no significant difference in the prevalence of infection in different villages (p>0.05). The gender and herd size had no association with the disease. The significant risk factors in generalized linear model for Trichophyton verrucosum livestock were cattle, young animals (<1 year age group), winter season and mix herds. This study reports for the first time, the presence of Trichophyton verrucosum in livestock of Pakistan. A better knowledge of the animal role in the spread of this fungus to humans may allow the adoption of more efficient control measures and prophylaxis.
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چھایا ہوا فضاؤں میں اس درجہ ڈر ہے آج
عریاں ہیں،بے لباس ہیں سوچوں کے زاویے
اک آسرے کے واسطے دو شانے چاہئیں
سورج کو کھینچ کھانچ کے ظلمت سے لائی ہے
دل نے سرابِ آرزو کاٹا ہے اس طرح
ہر قیس پیشہ، محملِ شہرت میں کھو گیا
اب کون کشتِ شعرکو خونِ جگر پلائے

 

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صحرا  بقیدِحیطۂ دیوار و در  ہے آج
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آسانیوں کی قید میں دستِ ہنر ہے آج

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Isolation, Structural Characterization and Docking Studies of Antileishmanial Compound from Endophytic Fungi of Taxus Fuana

Parasitic diseases like leishmaniasis are major worldwide health problem. Suboptimal therapies and emergence of resistance demands the exploration of all possible sources to find a new drug against leishmaniasis. In this search, endophytes have emerged as an outstanding source of high metabolic diversity. These microorganisms have recently attracted increased attention in the quest of pharmaceutically important compounds. Present study describes the biological evaluation of five endophytic fungi Plectania milleri NFL1, Trichoderma asperellum NFL2, Paraconiothyrium sp. NFL6, Mucor hiemalis NFW6 and Epicoccum nigrum NFW7 isolated from Taxus fuana of West Himalayan region of Pakistan followed by isolation and identification of compounds from selected endophytic fungi with prime focus on their antileishmanial activity. Endophytic fungal strains were initially cultivated on four solid state media (PDA, SDA, modified taxol medium and rice) and extracted with organic solvent ethyl acetate. The crude extracts obtained after extraction, were evaluated in phytochemical assays to determine the total phenolic and total flavonoid content. Biological activities of the extracts were determined by three antioxidant assays (total antioxidant capacity, reducing power and DPPH free radical scavenging assay), antibacterial assay against 8 bacterial strains, antileishmanial assay against two Leishmania sp. i.e. L. tropica and L. amazonensis and anticancer assays by evaluating the inhibition of NFƙB and K-Ras. Cytotoxic potential was evaluated against four human cell lines i.e. prostate cancer cell line PC-3, human colon adenocarcinoma cell line HT-29, estrogen receptor negative human breast cancer cell line MDA-MB-231 and breast cancer cell line MCF-7. Endophytic fungi showed variable biological activities with apparent effect of media used for fermentation. The highest amount of gallic acid equivalent phenolic and quercetin equivalent flavonoid content was found in M. hiemalis NFW6 and E. nigrum NFW7. While significant total antioxidant activity, total reducing power and DPPH scavenging activities were also exhibited by these two strains. Noteworthy antimicrobial activities were exhibited by P. milleri NFL1 and Paraconiothyrium sp. NFL6 particularly against S. epidermidis with zone of inhibition of 20 ± 0.87 and 20.7 ± 1.26 mm, respectively. Results for antileishmanial activities were pronounced xiiifor P. milleri NFL1 and M. hiemalis NFW6 against Leishmania sp. with IC 50 values of 1.5 ± 1.1 and 3.72 ± 1.7 μg/ml, respectively. Significant inhibition of NF-κB signaling pathway (>70 %) was exhibited by P. milleri NFL1 and E. nigrum NFW7. Similarly, P. milleri NFL1 and T. asperellum NFL2 showed pronounced K-Ras inhibition (>60 %). Endophytic fungi expressed significant cytotoxic activities against all the cancerous cell lines except human colon adenocarcinoma cell line HT-29. Most promising results were observed against breast cancer cell line MCF-7 where P. milleri NFL1, T. asperellum NFL2 and Paraconiothyrium sp. NFL6 expressed greater than 75 % inhibition. P. milleri NFL1 was the only strain which showed cytotoxic activity against three tested cell lines i.e. PC-3, MCF-7 and MDA-MB-231. Biological screening was followed by selection of P. milleri NFL1, M. hiemalis NFW6 and Paraconiothyrium sp. NFL6 for scale up fermentation and compound isolation. Crude extracts, obtained after the large scale fermentation of endophytic fungi, were fractionated by normal phase chromatography and subjected to antileishmanial assay for prioritizing fractions for compound isolation. Structure elucidation was done by 1D, 2D NMR along with mass spectrometry. As a result, three known compounds were isolated from P. milleri NFL1; pestalotin (L1F5F7F4), its analogue (L1F3F7) and galiellalactone (L1F4F4F4). M. hiemalis NFW6 resulted in the isolation of a single compound i.e. triolein (W6F4F4) while Paraconiothyrium sp. NFL6 also afforded one compound pachybasin (L6F8F14). All the compounds were evaluated for their antileishmanial and anticancer potential. Galiellalactone (L1F4F4F4) was the only compound with antileishmanial and anticancer activity among all the isolated compounds. Antileishmanial potential of galiellalactone has been reported in this study for the first time. In silico tools were employed in this study to understand the behavior of endophytic fungi produced compound galiellalactone (L1F4F4F4) with Leishmania proteins. Thorough study of the literature resulted in selection of three target proteins i.e. leishmanolysin, trypanothione reductase and cysteine protease in Leishmania. These proteins were selected on the basis of their essentiality for Leishmania and absence from human host. Unavailability of experimentally determined structure led to homology modelling of the selected proteins by using eight web-based servers. Comparative analysis was performed to select the most reliable protein model. xivIn silico evaluation of galiellalactone (L1F4F4F4) against leishmanial targets was completed by docking studies. The docking simulation between the ligand (L1F4F4F4) and target proteins was performed using AutoDock. Ligand-protein complex among all the three target protein was most stable in case of cysteine protease with hydrogen bond and electrostatic interactions and highest binding affinity of −6.5 kcal/mol. These findings give insights into possible action of galiellalactone against Leishmania. The Himalayan region of Pakistan has a huge biodiversity of medicinal plants including Taxus species. Antileishmanial potential of endophytes associated with Taxus fuana from this region has not been previously reported. These findings will highlight the bioactive potential of endophytic fungi and also act as a cornerstone for lead compounds for drug discovery and development.