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Genetic Analysis for Morpho-Yield and Seed Quality Traits in Rapeseed Brassica Napus L.

Thesis Info

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Author

Ishaq, Muhammad

Program

PhD

Institute

University of Agriculture

City

Faisalabad

Province

Punjab

Country

Pakistan

Thesis Completing Year

2015

Thesis Completion Status

Completed

Subject

Natural Sciences

Language

English

Link

http://prr.hec.gov.pk/jspui/bitstream/123456789/7783/1/M%20ISHAQ%20PBG%20PhD%20final%20thesis%20pdf.pdf

Added

2021-02-17 19:49:13

Modified

2024-03-24 20:25:49

ARI ID

1676726265749

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Edible oil is main import of Pakistan and its bill costs 2 billion US$ annually. To overcome this problem, emphasis needs to be focused on developing of new high yielding oilseed cultivars. To achieve this goal, information regarding genetic diversity, underlying gene action, development and assessment of hybrids are pre-requisite of breeding program. Keeping in view the edible oil situation in the country this study was conducted to determine genetic analysis for important traits in rapeseed (Brassica napus L.) using 8 × 8 diallel design at the University of Agriculture-Peshawar during 2011-2014. Parental lines and their F1 and F2 progenies were evaluated in two separate experiments to do F1 and F2 diallel analysis. Analysis of variance revealed highly significant differences for all studied parameters in parents and F1 generation. Based on mean performance best parents were AUP-7, AUP-2, AUP-14 and AUP-18 for important traits. Among F1 hybrids, AUP-7 × AUP-14, AUP-2 × AUP-7, AUP-7 × AUP-2, AUP-9 × AUP-17, AUP-9 × AUP-2, AUP-17 × AUP-8, AUP-14 × AUP-7 and AUP-18 × AUP-7 performed better. Mean squares due to general combining ability (GCA), specific combining ability (SCA) and reciprocal combining ability (RCA) were found highly significant for all the parameters indicating the importance of both additive and non additive gene action. On the basis of GCA, parental lines, AUP-7, AUP-2, AUP-18 and AUP-17 were found best combiners. Among F1s, desirable SCA effects were shown by AUP- 7 × AUP-14, AUP-8 × AUP-9, AUP-17 × AUP-18, AUP-14 × AUP-20, AUP-2 × AUP-9, AUP-2 × AUP-18, AUP-2 × AUP-18, AUP-2 × AUP-14, AUP-2 × AUP-17 and AUP-2 × AUP-9. Desirable negative mid and better parent heterosis were exhibited by AUP-18× AUP- 8 for flowering and AUP-8 × AUP-9 for maturity. Maximum positive heterosis was recorded by AUP-8 × AUP-17, AUP-9× AUP-2, AUP-20 × AUP-2, AUP-2 × AUP-8, AUP-14 × AUP- 2, AUP-14 × AUP-8 and AUP-14 × AUP-17 for morphological traits. However for oil quality traits best crosses were AUP-9× AUP-20, AUP-20 × AUP-17, AUP-7 × AUP-14 and AUP-18 × AUP-2, AUP-9 × AUP-2, AUP-7 × AUP-18and AUP-2 × AUP-7. Best performing parents and crosses could be an asset for future breeding programs. The data of F2 generation revealed significant genotypic difference for all traits. Among F2 populations, best performer were AUP-7 × AUP-17, AUP-17 × AUP-18, AUP-9 × AUP-17, AUP-18 × AUP-9, AUP-2 × AUP-14 and AUP-20 × AUP-14 for morpho-yield traits. F2 populations AUP-8 × AUP-7, AUP-2 × AUP-18, AUP-7 × AUP-8, AUP-9 × AUP-18 and AUP-14 × AUP-20 were superior for oil quality traits. Mode of gene action in F2 generation vi vii 17 for seed per pod, pod length, pods plant-1, 1000 seed weight seed yield plant-1 and quality parameters (oil, protein, oleic and linolenic acid) revealed that additive dominance was adequate (partially). The model was fully adequate for rest of the traits. Hayman analysis revealed both additive and non additive gene actions for all the traits. Estimates of genetic components showed significant and higher magnitude of additive variances for flowering, maturity and plant height, whereas for rest of the traits dominance was significant and higher in magnitude. Inequality of H1 and H2 revealed asymmetrical (uneven) distribution of genes among the parental lines (H2/4H1<0.25). From Vr/Wr graph, negative intercept of the regression line and average degree of dominance values and H1> D revealed that over dominance was responsible for all traits except flowering, maturity and Plant height for which partial dominance (D>H1) was observed. The scatter of array point on the regression lines for studied traits suggested that parental lines were diverse and could be used in future rapeseed quality breeding programs. From the estimation of genetic components of variation and low narrow sense heritability except for days to flowering, maturity and Plant height it is clear that non additive type of gene actions were more important in effecting the variation for all the traits. To exploit both additive and non-additive gene actions as observed under the present investigation, bi-parental mating and inter se crossing between suitable lines following reciprocal recurrent selection may be useful to develop high yielding and early maturing lines. Keywords: Rapeseed, Brassica napus, diallel analysis, genetic analysis, combining ability, gene action, heterosis, heritability,
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شخصيت انسانى پر شہادتين كے قرآنى اثرات

Allah Almighty sent mankind in this world for His worship only. This is high right on humans those who keep the faith and belief in the one Supreme God and obey His orders. When they followed satanic powers, they forgot the eternal lesson of Tawheed (Oneness of Allah) and engaged Shirk (polytheism). It is the dogma of Oneness of Allah with which mankind gets tranquility and peacefulness in society and becomesconstructive and valuable for humanity. And when human left his belief on Allah, they germinate their negative role and made the society despicable. In this scenario Allah Almighty sends His prophets to those nations which create mess and fill the society with clutter. At that time prophets play their role as a bounty of Allah on human race. They purify people by their teachings granted by Allah and focus their attention to the eternal massage of God. So Eman (faith) on prophet hood considered as essential as belief on Oneness of Allah. Both these beliefs; Tawheed and Risallah effect human life prominently in such a way that man redevelops his whole personality and becomes a required sound character of Eman. Then worldly contamination cannot harm human being's decency and he becomes a felicitous character of vigorous society.

Development of Affinity Chromatographic Tools for Evaluation of Proteins/Peptides from Biological Samples

Affinity chromatography has been a method of choice in last decade due to its higher selectivity and versatility for extraction and purification of target analytes. Enrichment of target proteins and peptides through affinity materials is one of the primary focused area of separation science. Field of proteomics has coupled the affinity chromatography to modern mass spectrometry techniques. A large variety of affinity materials for the selective capturing of phosphorylated biomolecules have been developed with varying efficiency. Carbon based nanomaterials have been used as affinity sorbents in phosphoproteomics with different modifications. Diamond nanopowder from carbon family is known for its biocompatibility and inertness towards biomolecules. It is therefore commonly used in the field of separation science and life science. In this work, the diamond nanopowder is modified to design affinity sorbent for phosphopeptides enrichment. Diamond nanopowder is functionalized as IMAC (Immobilized Metal Affinity Chromatography) material loaded with Fe3+ and La3+ ions and MOAC (Metal Oxide Affinity Chromatography) material in the form of composites with lanthanum oxide and samarium oxide. The characterization is carried out by Fourier transform infrared (FT-IR) spectroscopy, scanning electron microscopy (SEM), atomic force microscopy (AFM) and energy dispersive X-ray (EDX) spectroscopy. Diamond-IMAC material is synthesized for phosphopeptides enrichment and diamond reversed phase (C-18) media for desalting of smaples and profiling of human serum. Optimization of phosphopeptides enrichment to diamond-IMAC material loaded with Fe3+ and La3+ ions is carried out by standard protein digest (β-casein) followed by the real biological samples. Material shows excellent selectivity for phosphopeptides from complex samples such as non-fat milk and human serum. Furthermore, diamond-IMAC is also applied to the serum samples from gall bladder carcinoma and it shows excellent specificity towards phosphopeptides. MOAC materials, i.e. diamond-lanthanum oxide and diamond-samarium oxide composites show selectivity upto 1:3000 and 1:1500 (β-casein: BSA ratio) while sensitivity down to 1 fM and 20 fM levels, respectively. Enrichment efficiency is evaluated for non-fat milk as semi-complex sample and 18 phosphopeptides are enriched from the milk digest. Human serum, without any pre-treatment is also applied and nanocomposites capture characteristic xix | P a g e phosphopeptides from human serum. The materials show promise towards identifying the phosphopeptides biomarkers from body fluids. Apart from diamond nanopowder, Titania grafted magnetic sporopollenin is also synthesized by the liquid phase deposition (LPD) technique as an affinity material for phosphopeptides enrichment. The material exhibits good selectivity, sensitivity and capacity for phosphopeptides from standard samples (β-casein and BSA mixture). Enrichment of phosphorylated peptides is carried out from milk digest, diluted human serum and rat brain cell lysate. The material is further applied to tryptic digest of rat brain cell lysate for phosphopeptides enrichment where 2718 phosphopeptides are identified by using LC-MS/MS. TiO2 coated magnetic material shows better enrichment efficiency in comparison to the commercial TiO2. The magnetic property of Titania coated magnetic sporopollenin facilitates the fast and effective isolation of phosphopeptides from complex mixtures through external magnet.Similarly, an anion exchange affinity using polyethylenimine modified chitosan nanomagnets is developed for the enrichment of phosphopeptides from biological samples. A two step strategy is used to synthesize the affinity sorbent. The potential of anion exchange affinity material is evaluated through β-casein digest. Enrichment parameters such as pH of loading (pH:2) and elution buffer (pH:11), loading time (5 minutes), selectivity (β-casein and BSA ratio 1:1000), sensitivity (1 fmol) and reproducibility have been optimized before applying it to real biological fluids such as egg yolk digest, non-fat milk digest and diluted human serum. The material shows excellent enrichment efficiency from complex biological fluids. Simple and low cast synthesis, fast enrichment due to magnetic nature have been some of the attributes of this anion exchange material. All these affinity materials show excellent results in terms of phosphopeptides enrichment and can be applied to cancer protein profiling for the diagnosis and biomarker identification after further optimizations.