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Home > Genetic Analysis for Nitrogen Use Efficiency and Yield Associated Traits in Bread Wheat

Genetic Analysis for Nitrogen Use Efficiency and Yield Associated Traits in Bread Wheat

Thesis Info

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Author

Khan, Fahim Ullah

Program

PhD

Institute

The University of Agriculture

City

Peshawar

Province

KPK

Country

Pakistan

Thesis Completing Year

2016

Thesis Completion Status

Completed

Subject

Botany

Language

English

Link

http://prr.hec.gov.pk/jspui/bitstream/123456789/7987/1/Fahim%20PhD%20Thesis_Final%20complete%20thesis.pdf

Added

2021-02-17 19:49:13

Modified

2024-03-24 20:25:49

ARI ID

1676726265936

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Development of nitrogen (N) efficient bread wheat cultivars better suited to limiting nitrogen condition is one of the prime objectives in plant breeding research. Three years (2013/14, 2014/15 and 2015/16) study was carried out to investigate genetic variability, identify traits influencing N use efficiency (NUE) and their pattern of inheritance using Hayman and Griffing approaches at The University of Agriculture, Peshawar Pakistan. During 2013/14, 30 wheat varieties released during 1981 till 2013 were preliminary screened under high nitrogen (Recommended dose, N+) and low nitrogen (N0) conditions as independent experiments. Significant G×E for all traits justified independent analysis. Independent analysis revealed significant genotypic variation for all traits under each level of nitrogen. Significant reductions under N0 condition for all traits signified the role of nitrogen fertilization in crop production. Path coefficient analysis identified biological yield, grain nitrogen content, harvest index and grain growth rate as direct contributors, whereas, tillers m-2 and 1000 grains weight, biological growth rate, total nitrogen uptake and nitrogen harvest index as indirect contributors for the improvement of NUE in bread wheat. Based on stress selection indices, cluster analysis, principal components analysis and 3D biplot analysis Shahkar-13 (Shk), Pirsabak-05 (PS) and Tatara (Tat) were classified as N-efficient, while Hashim-08 (Hsm), Inqilab-91(Inq) and Pak-81 (Pak) were found as N-inefficient varieties. During 2014/15, an objectives-based hybridization program was initiated by crossing two contrasting groups of varieties to generate a 6 × 6 straight diallel. In the following year, 15 F1 hybrids along with six parent cultivars were evaluated under N+ and N0 conditions. Significant GEI for all traits necessitated independent analysis under each nitrogen level, which exhibited significant variation among genotypes justifying genetic analysis for all traits. Diallel analysis of variance exhibited preponderance of non-additive gene action in the inheritance of all traits under both N+ and N0 conditions. However, non-additive genetic effects for days to emergence, anthesis, maturity and grain filling duration were changed to additive genetic control under N0 condition. Pre-dominant role of non-additive genetic effects was further validated by the greater proportion of dominance than additive genetic variance, higher magnitude of H1 than D genetic component, proportion of dominant genes, average degrees of dominance (>1), Wr/Vr graphs and low narrow sense heritability. Position of parents along the regression line expressed that Tatara20 96 and Hashim-08 possessed more dominant and recessive genes, respectively for most of the traits. Heritability estimates both in narrow and broad sense were greater under N+ than N0 condition for most of the traits. Low to moderate ratio of narrow and broad sense heritability for most of the traits exhibited that non-additive variance was predominant than additive variance in the expression of these traits. Combining ability analysis revealed the significance of both GCA and SCA effects for almost all traits. Traits with GCA/SCA ratio less than 1 indicated importance of non-additive genetics effects in phenotypic expression of these traits. Tatara appeared as best general combiner for all important NUE and yield associated traits. Relative ranking of crosses for SCA effects were not the same under both N+ and N0 conditions. The F1 hybrid, Shk × Hsm expressed maximum SCA effects for most of the important traits under both N+ and N0 conditions, whereas, PS × Shk was ranked as top specific combination for most of the traits only under N0 condition. Correlation analysis suggested that mean values of both parents and F1 hybrids predict their suitability as general or specific combiner. Better parent heterosis was exhibited by cross combinations Shk × Hsm and PS × Tat for most of the important traits under N+ and N0 conditions, respectively. Both Hayman and Griffing analyses revealed the involvement of non-additive gene actions in the phenotypic expression of most of the traits. Non-additive genetic variance of traits warranted improvement through delayed selection. Besides exploring genetics of N-efficient lines, this study also identified some indices for selecting N-efficient wheat lines. Cross combinations Shk × Hsm, PS × Shk and PS × Tat with higher SCA and heterobiltiosis may be useful in evolving wheat cultivars with enhanced NUE.
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Expression Analyses, Efficacy Studies and Environmental Risk Assessment of Insecticidal Proteins Produced in Transgenic Plants

Insect pests are a serious threat to agricultural crops all over the world as they cause huge losses to crop yield and economy. Due to low innate immunity in plants, synthetic insecticides have been used to cope with the pest problem since decades. These chemicals are expensive, broad spectrum and hazardous to health and environment. Moreover, most of the target insect species have developed resistance against the available insecticides. Therefore, search for alternative methods of insect pest control has been a priority in agricultural research. One of the successful methods is to develop Insect Resistant, Genetically Modified Crops (IR-GMCs) expressing insecticidal proteins. IR-GMCs have been rapidly adopted around the world as they are target specific, environment friendly, cost effective and easy to use. However, two major risks of growing IR-GMCs have been proposed; resistance development against insecticidal toxins (e.g. Cry proteins) expressed in plants and adverse effects to beneficial, nontarget arthropods (NTAs). NTAs include important species that contribute directly to agricultural ecology via biological control, pollination and decomposition of organic materials. Pakistan officially adopted Bt-cotton in 2010 and became one of the leading countries in terms of area under cultivation by 2013. Variation in the expression of Bt proteins have been associated with reduced efficacy of the IR crops and also resistance development in the target insect pests. Therefore, one of the objectives of this study was expression profiling of first batch of approved, locally bred Bt-cotton varieties through ELISA and efficacy analysis against Helicoverpa armigera. While Bt cotton varieties are effective in controlling several key lepidopteran pests, they are less effective against some Lepidoptera species and provide no protection against non-lepidopteran pests. In addition, the initial cases of resistance to Cry1Ac have been observed in target insect pests in many countries. It is thus indicated to explore alternative source for toxins that can be incorporated in future transgenic plants. The peptide ω-Hexatoxin-Hv1a (Hvt) is one of the most studied spider venom toxins. Its insecticidal potential has been reported for species belonging to different arthropod orders including Lepidoptera, Diptera and Orthoptera. The gene encoding for Hvt has thus been transformed into cotton and tobacco to protect the plants from damage by Lepidopteran pests. 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Critical level of Cry1Ab/1Ac in leaves was found to be 770±25 ng g-1 for 95% control of the target insect pests. In studies with Hvt plants, 100% larval mortality was observed on Hvt-transgenic tobacco line T-21 and cotton line T-7 plants but not on cotton line T-10. The likely reason was the significantly lower expression level in the transgenic cotton line T-10. When fed on artificial diet containing purified Hvt protein, LC95 values for Spodoptera littoralis and Heliothis virescens were found to be 28.31 and 27.57 μg mL-1, respectively. Non-target studies were performed with two predatory species, larvae of Chrysoperla carnea and Coccinella septempunctata, adult females of the aphid parasitoid Aphidius colemani, and adult workers of honey bees Apis mellifera. Orally administered Hvt protein even at a concentration of 40 μg mL-1 did not affect a number of life-table parameters of tested NTAs. Similarly purified Cry2Ab2 did not cause adverse effects on any of the non-target species tested at a concentration of 10 μg mL-1. However, detailed molecular work is required to determine the fate of orally administered Hvt protein in these species. Hence, Hvt might be an interesting candidate for developing insecticidal plant varieties to control pest Lepidoptera. However, the concentration at which the protein is available in the plants appears to be critical in determining its efficacy against target pests. Therefore, breeders and biotechnologists must combine genotypes and promoters promising higher expression of insecticidal proteins. Furthermore, detailed risk assessment studies may be conducted before commercial release of Hvt cotton and tobacco.