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Genetic Evolution and Development of Recombinant Vaccine Against Newcastle Disease for Chicken in Pakistan

Thesis Info

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Author

Wajid, Abdul

Program

PhD

Institute

University of Veterinary and Animal Sciences

City

Lahore

Province

Punjab

Country

Pakistan

Thesis Completing Year

2017

Thesis Completion Status

Completed

Subject

Newcastle

Language

English

Link

http://prr.hec.gov.pk/jspui/bitstream/123456789/9909/1/Abdul%20%20Wajid_Molecular%20Biotech_2017_UVAS_HSR-14-12-17.pdf

Added

2021-02-17 19:49:13

Modified

2024-03-24 20:25:49

ARI ID

1676726298670

Similar


Newcastle disease (ND) is considered as a highly infectious disease of poultry worldwide. The commercial broiler industry is highly susceptible to virulent NDV, the data indicating heavy losses and documentary proof is available on NDV surveillance program. However, a little is known regarding the maintenance and enzootic trends of vNDV infection level in domestic and wild birds. Poor vaccination strategy as well as the existence of virulent form of NDV in the domestic birds indicates a root cause of the occurrence of disease eruption in the developing countries. Here, we report the eleven complete genome sequences of NDV from lovebird parrot (n=1) and exotic parakeets (n=3), backyard chickens (n=5), peacock (n=1) and pheasant (n=1). The complete genome lengths of all isolates were 15,192 nucleotides (nt) with same virulenceassociated cleavage site (112-RRQKRF-117) and selected ones have intracerebral pathogenicity index (ICPI) values ranging from 1.50 to 1.86, which is typical of vNDV. The deduced amino acid residues analyses have shown a number of substitution mutations in the functional domains of fusion and hemagglutinin-neuraminidase proteins. Phylogenetic analysis showed all NDV isolates belong to sub-genotypes VIIi within the genotype VII of class II. The isolation of highly similar viruses (98-99%) during 2011-16 provides the evidence of an epidemiological links between poultry, domestic and wild birds. Our results also support the existence of fifth panzootic as these viruses primarily isolated from South Asia, Middle East and Indonesia and recently spread into Eastern Europe. Active surveillance of these newly emerging viruses to determine their evolution is one of the most realistic strategies for preventing and controlling NDV outbreaks.
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عذابِ کم نگاہی

ورنہ پنجرے میں پرندے نہ دہائی دیتے
آسماں چھوتے ہوئے پیڑوں نے غداری کی
ا سے فاصلے پر
رتجگے میں خیمہ زن ہے،
اسے یہ کون سمجھائے....
کہ یوں آوارگی کی زد پہ رہنے
اور
آبائی ٹھکانہ تج کے جانے سے..... کسی کا کچھ نہیں جاتا،
فقط خوابوں کو بے گھر ہونا پڑتا ہے،،،
متاعِ بے بہا کو کھونا پڑتا ہے،
ہمیشہ واسطے
آنکھوں کو اشک-شفق گوں ہی رونا پڑتا ہے،
"عذابِ کم نگاہی"
عمر بھر کو ڈھونا پڑتا ہے...
بہت خوش رنگ اور دلکش مناظر کو
بہت گہرے دھندلکوں کی
کسی گہری گراوٹ میں
ابد تک سونا پڑتا ہے...!!!
اسے یہ کبہت دن سے ہماری نیند
آنکھوں سے ذردل کے زخموں نے جب آنکھوں میں نموکاری کی
میں نے خوش رہنے کی بھر پور اداکاری کی

کچی پگڈنڈی کسی طور عیاں کرتی نہیں
شہرِ کم ظرف پہ تاثیر وفاداری کی

مجھ سے چھینی ہے مری پیاس کسی دریا نے
میں نے یونہی نہیں صحرا کی طرفداری کی

غم کی تشہیر اگر حب کی علامت ھے تو دوست
میرا رونا بھی سند مان لے حبداری کی

ہم زمیں زاد فلک سمت نہیں دیکھیں گے
ہاں وہ دیکھے جسے اُمید ہو غمخواری کی

یعنی یک لخت مجھے تنہا کیا, چھوڑ دیا
یہ عجب اپنے تئیں اس نے سمجھ داری کی
ون سمجھائے؟

شیخ ابن تیمیہ کےاصولی تفردات کا تجزیاتی مطالعہ An Analytical Study of the Ibn-e-Teymiyah’s Usooli Distinctions

The very existence of theology was a prelude to the competition of philosophy and the support of religion. Other religions, for the sake of legitimacy of their religion, have been raising objections to Islam in all respects. The mixture of nations, non-Arab influences, the negligent rhetoric of scholars and shaykhs, and the erroneous beliefs and practices of the people were tarnishing the clean face of Islam. In the time of Ibn Taymiyyah, there was an emphasis on theology. Theologians specialize in their knowledge and art of rationalism and logic. Their method consisted of reasoning and inference, rational and logical proofs. In contrast to them, the Hanbalis were holding the line of reasoning from the apparent meaning of verses and hadiths and texts. In the case of debates and debates, the weight of the theologians would be heavy and the opponent would be considered ignorant. Ibn Taymiyyah paid homage to the authenticity and supremacy of the Qur'an and Sunnah in such a way that he made critical commentary and analysis on philosophy and Greek logic and reasoned weaknesses and errors. One-half or two-thirds of his total writing services on the subject of speech and logic. This shows that Ibn Taymiyyah was feeling the need of defending Islam in this regard because in his time these sciences and arts had become very popular and common practice. The far-reaching effects of his thoughts and opinions in this regard have been felt in every age. The issues in which he has differed are the result of his research, jurisprudence and ijtihad, and constant reflection. The basis and foundation of which is the Quran and Sunnah, the interaction of companions and speculation. In these Ijtihad issues of hiss, there is a collection of arguments and proofs related to the Quran and Sunnah. In this article, an introductory and analytical study of Ibn Taymiyyah's fundamental differences will be presented.

Molecular Characterization of Microbial Oxidoreductases and Their Application in Polymer Biodegradation

The detoxification of xenobiotic organic compounds by various microorganism through oxidative coupling is facilitated with oxidoreductases. With the help of energy yielding biochemical reactions these microbes extract energy for their metabolic pathway. They promote the transfer of electrons from a reduced organic substrate to another chemical compound. Enzymatic bioremediation of toxic organic pollutant is the very effective strategy in complex environmental conditions. Oxidoreductases enzyme have a significant potential for the bioremediation of the xenobiotic compounds. Various electron donor complex polymeric substrates containing Phenol and aromatic amines oxidized by peroxidase in the presence of H2O2 while O2 in the case of dioxygenase. Fungi are important among microorganisms for production of extracellular peroxidases. The present study aimed for production and characterization of peroxidases (laccases and lignin peroxidases) and dioxygenase for polymer biodegradation. Fungal strains named as Nk-1, Nk-2, Nk-3 and Nk-4 were selected and processed for different optimization studies. NK- 1 was identified 18s rRNA sequencing as Phanerocheate chrysosporium was further selected for enzyme production. Maximum enzyme production was observed at temperature at 30°C, pH 5.5. Statistical analysis indicates the significance of model and components based on F value and P value <0.05. Purification of enzymes was done by column chromatography. The molecular weight estimation was carried out by Sodium dodecyl sulphate SDS. Fourier transform infrared (FTIR) spectroscopy of enzyme treated substrate revealed the structural changes as compared to control (without enzyme treatment). The decrease in weight (0.08g) was observed in enzymes treated film then control (0.1g). FTIR spectroscopy of enzyme treated plastic film revealed the structural changes as compared to control (without enzyme treatment) i.e. a new peak appeared at 3367 cm -1 (Alkenyl C-H stretch). The peak at wavelength 1633 cm-1 (C=C stretching vibration of aromatic ring) in treated sample was sharp and larger as compared to the control. A visible change in surface of PVC films in term of surface erosion was observed by Scanning Electron Microscopy (SEM) after enzyme treatment. Peroxidase enzymes have wide range of applications from biodegradation of recalcitrant compounds to paper and pulp, cosmetic, food and textile industry. Enhanced production from food waste as cheap substrate was studied. Biosynthesis of lignin peroxidase, manganese peroxidase and laccase enzymes from food waste as a substrate is possible and their production can be enhanced by optimizing different factors. The native way of synthesizing dioxygenase, laccase and lignin peroxidase are not enough to the current industrial demands mostly because of their small amount of yield and the high cost of purification or synthesis. Heterologous expression may allow the production of laccase and lignin peroxidase in higher amount and with desired characteristics. In the present research study, the heterologous expression of fungal lignin peroxidase and laccase were performed in the cells of DHα5 strain of E. coli bacteria. With the help of shake flask experiment, the enzyme assay for enzymes was performed and a variation in the enzyme activity was observed during incubation time. Molecular weight of lignin peroxidase and laccase were found to be 46 kDa and 66 kDa respectively, as determined by the SDS-PAGE analysis. The enhanced production of fungal lignin peroxidase and laccase can be achieved through heterologous expression in bacterial host so that the biodegradation of recalcitrant plastic waste can be speed up.