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Home > Genetic Polymorphism of Mitochondrial Dna As Tool for Forensic Discrimination and Comparison of its Diversity Among Various Ethnic Groups of Pakistan.

Genetic Polymorphism of Mitochondrial Dna As Tool for Forensic Discrimination and Comparison of its Diversity Among Various Ethnic Groups of Pakistan.

Thesis Info

Access Option

External Link

Author

Bhatti, Shahzad

Program

PhD

Institute

University of Health Sciences

City

Lahore

Province

Punjab

Country

Pakistan

Thesis Completing Year

2017

Thesis Completion Status

Completed

Subject

human Genetics

Language

English

Link

http://prr.hec.gov.pk/jspui/bitstream/123456789/14568/1/Shahzad%20Bhatti%20Human%20Genetics%202017%20UHS%20lhr%20prr.pdf

Added

2021-02-17 19:49:13

Modified

2024-03-24 20:25:49

ARI ID

1676726307958

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Because of its geo strategic position at the crossroad of Asia, Pakistan has gained crucial importance of playing its pivotal role in subsequent human migratory events, both prehistoric and historic. This human movement became possible through an ancient overland network of trails called “The Silk Route” linking Asia Minor, Middle East China, Central Asia, and Southeast Asia. The present study was designed to investigate the control region in 500 unrelated individuals of 22 ethnic groups of the Pakistani population. In order to discourse the genetic diversity, affiliations and origin of castes of Punjab and tribes of Baluchistan, KPK and Sindh. The study revealed high genetic diversity in Pakistani population which is comparable to the other Central Asian, Southeast Asian and European populations. For this purpose Sequence analysis scrutinized, 412 haplotypes, defined by a particular set of nucleotides were found (ignoring the C insertions around position 309 and 315) in 22 ethnic groups. In spite of that 65% sequences were observed once, 11 %, twice, 8 % thrice, 5 % four time and 2.2 % five times. The most common South Asian haplotypes are observed, M 46 %, N 7 %, and R 13%, while West Eurasian haplotypes are U 18%, H 5%, J 4%, W 3% and T 2% in 22 ethnic groups. The mean number of pairwise differences were observed 5.2 ± 2.8 to 12.5 ± 6.2. A random match probability between two unrelated individuals was found between 0.01 to 0.06 %. While genetic diversity was found to be 0.991 to 0.999, with nucleotide diversity ranging from 0.0089 to 0.0142 for the whole control region in Pakistani population. The configuration of genetic variation and heterogeneity further unveiled through Multidimensional Scaling and phylogenetic analysis. The results revealed that Pakistani ethnic groups are the composite mosaic of West Eurasian ancestry of numerous geographic origin. They received substantial gene flow during different invasive movements and have a high element of the Western provenance.
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29. Al-‘Ankabut/The Spider

29. Al-‘Ankabut/The Spider

I/We begin by the Blessed Name of Allah

The Immensely Merciful to all, The Infinitely Compassionate to everyone.

29:01
a. Alif. Lam. Mim.

29:02
a. Do the people think they can get away with just uttering the word:
b. ‘We believe,’
c. and they will not be tested?

29:03
a. And certainly, WE did put to the test those before them,
b. and will be putting people to the test now and always, too.
c. So Allah will surely make known those who are sincere believers,
d. and, HE will also make known those who are liars.

29:04
a. Or, do those who do sinful deeds reckon that they can escape US?
b. No. Never!
c. How wrong do they judge!

29:05
a. As for those who look forward with hope and awe to the meeting with Allah should hold
firm -
b. for the appointed time by Allah is definitely coming.
c. And, HE is The All-Listening, The All-Knowing.

29:06
a. So whoever strives in the Cause of Allah is striving only for the benefit of oneself,
b. for Allah is All-Sufficient and is not in need of anyone in the universe.

29:07
a. As for those who believe and practice righteousness,
b. WE will definitely absolve them of their evil deeds,
c. and WE will certainly reward them for the best of what they used to do in the worldly life.

29:08
a. And WE have enjoined upon every person to be good to his parents in matters of love, respect, and care,

b. and yet should they urge...

انسان کی تعمیر و ترقی بذریعہ قرآن کریم

The Holy Qur’ān is a complete code of life or system of life for whole humanity. It gives complete guidance for human life from birth to death and for eternal life as well. The Qur’ān were the only book that changed the lives of the companions of Prophet Muhammad (ﷺ). And they became the most successful persons of the world. They ruled over three continents successfully with the guidance mentioned in Holy Quran. Today, we must adopt the guidance of Holy Qur’ān to change the humanity. In his thesis we addressed all aspects of human life including beliefs, modes of worship and customs of individual life, and also provided the guidance about the collective aspects of life, such as the economic aspects, as well as full instructions of political system and social aspect as well. So, counter the transcend world and get the eternal peace, success, and tranquility through Holy Quran.

A Molecular Study of Oral Squamous Cell Carcinoma and Preneoplasia in Relation to Oncogenetic Mechanisms in Pakistan

Background: Oral cancer is a major problem globally and more so in Pakistan as it ranks as the second most common malignancy with an aggressive nature and a high mortality despite modern, advanced treatment options. The strong causal association with smoked and chewed tobacco and its substitutes, prevalent in this region makes it imperative to consider the mutation analysis of molecular genetic profile and the role of HPV in oral oncogenesis. It would help in early and accurate detection of targets for therapeutic implementations. Objectives: To identify the genetic mutations in a subset of Pakistani patients of oral cancer and precancer with dominant exposure to a different set of environmental carcinogens as betel quid, arecanut and its substitutes. Moreover to identify the role of HPV in oral carcinogenesis with interactive relationship of chemical and viral carcinogens. Methodology: Hundred clinically diagnosed and histologically confirmed cases of OSCC and 50 cases of oral premalignant lesions were included in the study. Details of demographic data alongwith personal habits concerning tobacco related carcinogen exposure were noted. A meticulous local and general examination was conducted. Controls were included for histological and molecular comparisons. The tissues obtained at biopsy or surgical resections were subjected for routine histopathological reporting followed by Immunohistochemical analysis of commonly reported mutated oral cancer genes in oral cancer viz p53, p16, H ras, CyclinD1, C Myc, and EGFR. HPV 16 and18 status was detected by Q- PCR. Statistical evaluation was done by SPSS version 16. Results: The ages of 100 patients of OSCC ranged from 25-80 years and 50 preneoplasia from 26 – 65 years with the mean age being 47.84+/- 12.18 and 40.22+/- 9.66 respectively. In OSCC group 74 were males and 26 were females, in preneoplasia 35 were males and 15 females; the male to female ratio being 2.84:1 and 2.33:1, respectively. Ninety one patients of OSCC and 46 (92%) of oral preneoplasia were exposed to tobacco, BQ and BQS, 29 and 32 were exposed to a combination of these. Cheek was the most common site for OSCC (50%) and OPL (42%). Nearly half (48%) of OSCC were well differentiated and majority (74%) presented in advanced stages III and IV. In oral preneoplasia cases 80% presented as leukoplakia and 50% showed mild dysplasia. HR- HPV 16 and 18 were found to be positive in 15 (15%) cases of OSCC and 3 (6%) cases of oral preneoplasia presented with greater prevalence of HPV 16. p53 nuclear protein positivity was seen in 70 (70 %) cases of OSCC and 27 (54 %) of OPL significant correlation (p <0.05) with chemical risk factors was found. Lack of immunoexpression of p16 was observed in 82 (82 %) cases of OSCC and 43(86%) of OPL. EGFR revealed membranous staining in 68 ( 68 %) of cancer cases and in 23 (46 %) dysplastic oral lesions. A strong association was seen with the most common BQ and tobacco chewing habit and significant correlation was observed with stage of oral cancers. H ras cytoplasmic immunoexpression was detectable in a significantly high proportion (50%) of oral cancers and premalignant lesions 17 (34 %). C myc nuclear positivity was observed in 36 /100 (36%) cases of Invasive oral squamous carcinomas and 11 / 50 (22%) cases of premalignant dysplasias. Cyclin D1 gene overexpression with evidence of nuclear positivity was detected in biopsy materials of 40 (40%) oral cancers and 14 (28%) dysplastic oral precancerous lesions. Highly significant coexpression (p<0.05) of HPV was observed with p16 and negatively significant with p53. A significant negative association (p < 0.05) was seen among p16 positive oral cancer cases and p53 and EGFR. Conclusion: A strong etiologic role of chemical carcinogens as smoked and chewed tobacco, betel quid and its substitutes is confirmed in Pakistani population. A frequency of molecular alterations was detected in p53, p16, EGFR and H ras; in early stages of oncogenesis. HR- HPV was detected in a substantial number of oral cancers and preneoplasias but chemical carcinogens have a dominant role. Overexpression of p16 was found in HR HPV positive cases. Key words: Oral Squamous cell carcinoma, Oral premalignant lesions, Betel quid, tobacco, areca nut, immunohistochemistry, molecular markers, HPV, PCR.