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Home > Understanding the Molecular Basis of Cotton Leaf Curl Disease Resistance in Cotton Germplasm.

Understanding the Molecular Basis of Cotton Leaf Curl Disease Resistance in Cotton Germplasm.

Thesis Info

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Author

Ullah, Rahim

Program

PhD

Institute

Pakistan Institute of Engineering and Applied Sciences

City

Islamabad

Province

Islamabad.

Country

Pakistan

Thesis Completing Year

2016

Thesis Completion Status

Completed

Subject

Biotechnology

Language

English

Link

http://prr.hec.gov.pk/jspui/bitstream/123456789/9810/1/Rahim_Ullah_Biotech_2016_PIEAS_main%20part.pdf

Added

2021-02-17 19:49:13

Modified

2024-03-24 20:25:49

ARI ID

1676727637574

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The production and processing of cotton is a major source of foreign exchange for the economy of Pakistan. The majority of cotton fiber produced in the region comes from the tetraploid Gossypium hirsutum, although some is still produced from the cotton species native to the region, the diploid G. arboreum. Since the early 1990s, cotton production in Pakistan and northwestern India has been adversely affected by cotton leaf curl disease (CLCuD). The disease is caused by single-stranded DNA viruses of the genus Begomovirus (family Geminiviridae) in association with a specific satellite, Cotton leaf curl Multan betasatellite (CLCuMuB). At this time only a single virus, Cotton leaf curl Burewala virus (CLCuBuV), is associated with CLCuD across most of Pakistan. This virus is resistance breaking, overcoming resistance to the previous begomoviruses/satellite complex that was introduced into cotton by conventional breeding. At this time there are no commercially available G. hirsutum lines that are resistant to CLCuBuV/CLCuMuB. However, all lines of G. arboreum are “immune” to CLCuD and plant breeders have long been trying to introduce the “resistance” from this species into the more desirable G. hirsutum lines. In addition, recently two lines of G. hirsutum originating from France (cvs. Dominique and Haiti) have shown promise in field screening for resistance against CLCuD. The study described here was designed to investigate the nature of the resistance of G. arboreum cv. Ravi and the French G. hirsutum cultivars, Dominique and Haiti, using whitefly-mediated and graft inoculation of the CLCuD virus complex. Additionally the possibility of using biolistic inoculation of viral DNA was investigated as a possible means of experimentally introducing the virus complex causing CLCuD into cotton. In large scale field screening of G. arboreum cv. Ravi over a period of two years, no symptoms of virus infection were detected under inoculation pressure conditions where 79-89% of the susceptible control (G. hirsutum cv. CIM 496) plants were symptomatic. Rolling circle amplification/polymerase chain reaction xiii (RCA/PCR) diagnostics, the most sensitive diagnostic method available to detect geminiviruses in plants, did not detect either CLCuBuV or CLCuMuB in field grown G. arboreum cv. Ravi plants; consistent with the idea that G. arboreum is immune to the virus complex. However, graft inoculation with scions from CLCuD affected G. hirsutum showed firstly that the virus complex can move systemically in the plant and that G. arboreum can respond to virus infections by the production of symptoms. Surprisingly, in a few cases, the disappearance of established symptoms was seen following removal of the graft. In all graft inoculated Ravi plants, after removal of the graft, newly emerging tissues were non-symptomatic and no virus could be detected. These results show that, rather than being immune, G. arboreum is highly resistant to the CLCuD complex and has a high virus/satellite threshold for the induction of symptoms, which whitefly inoculation likely is not able to achieve. The low virus levels detected in G. arboreum suggest that possibly the resistance targets virus/satellite replication and, without a continual source (such as from a graft), the virus/satellite complex is rapidly lost. In small-scale, glasshouse-based insect transmission studies, plants of G. hirsutum cvs. Dominique and Haiti remained symptomless under conditions where all G. hirsutum cv. CIM 496 plants became infected. Graft inoculation showed the Dominique and Haiti plants to be susceptible but showing only mild symptoms, slightly higher than in grafted G. arboreum cv. Ravi plants. The virus/satellite levels in such plants were lower than in the susceptible control but higher than detected in G. arboreum cv. Ravi. Upon removal of the graft, newly developing leaves did not show symptoms and no virus/satellite could be detected. The response to infection seen in G. hirsutum cvs. Dominique and Haiti very much mirrors what was seen for G. arboreum cv. Ravi. Recovery from infection has, for other viruses, been shown to be an RNA interference phenomenon and the results are discussed in light of this possibility. G. hirsutum cvs. Dominique, Haiti, Coker and S-12, as well as G. arboreum cv. Ravi plants were biolistically inoculated with cloned CLCuBuV/CLCuMuB, Cotton leaf curl Kokhran virus (CLCuKoV; a begomovirus prevalent in cotton in Pakistan in the 1990s)/CLCuMuB and with RCA products from field-infected G. hirsutum cv. CIM 496 plants shown to be infected with CLCuBuV/CLCuMuB. Only a small number of Coker and S-12 plants, inoculated with cloned xiv CLCuKoV/CLCuMuB, became infected and showed the typical symptoms of CLCuD. Overall the findings indicate that G. hirsutum cvs. Dominique and Haiti harbor a useful resistance to the virus(es) causing CLCuD which should be used for introgression into elite cotton varieties. The results obtained with G. arboreum cv. Ravi indicate that, rather than being a non-host, this harbors extreme resistance to the viruses causing CLCuD and further efforts should be made to characterize the molecular basis for the resistance. Finally the biolistic studies indicate that this can potentially be a useful method for experimentally introducing begomoviruses/satellites into which should be investigated further.
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کردے رہو نت کسب کمال

کر دے رہو نت کسب کمال
کھائو مت پرایا مال
امت دے رکھوالے بن کے
آئے آپ سخی لجپال
بے فیضے یاراں نے رل کے
کیتا سانوں آن کنگال
منہ شریک دا رتا ہووے
اپنا کریے چاٹاں نال
چادر ویکھ کے پیر پھیلایئے
رکھیے اپنا آپ سنبھال
روشن چن ستارے بھانویں
گھر دا رکھیے دیوا بال
جیہڑا ہتھاں نال کمائو
اوہو سمجھو رزق حلال
اپنی کہن سیانے بھلیا
’’کوا چلیا ہنس دی چال‘‘
لوکی پہنچے چن دے اتے
توں حنیف نہ بدلیں حال

The Impact of the Prophetic Sunnah on Character Building of an Individual Person

Character building of a person is very necessary to make any society better, healthier and superior as the construction of society depends upon the people's character building. A number of crime cases are evident that the character of most people is already in alarming phase. However family members, society, Islamic schools mad?ris, universities, and cultural activities can play vital role in character building. Improvement in our current situation as well as development of our future depends upon the building of people character. This study aims to highlight the impact of the Prophetic Sunnah and to show its effective role in building the character of a person individual through the selection of practical models of the true Sunnah, for example, showing great care for all aspects of human such as materialistic, mental and spiritual aspects. If we really want to improve our society or turn it to perfection, people will have to focus on character building, particularly on people's moral, spiritual and social character so that society can present the real portrait of peace and prosperity. This study concluded that the Prophetic Sunnah is rich in the educational principles which preceded the contemporary research and theories, making it first reference as a basic requirement.

Determining the Optimum Timing of Insecticide Applications to Manage Aphids on Canola in Southern Punjab Pakistan

Canola, Brassica napus L. is a minor oilseed crop in Pakistan but for various reasons is increasing in importance as its oil being healthy and to share country oil production as currently 71% of the required edible oil in country is being imported. A complex of aphids is the main pest for low crop harvests sometimes reaching to complete crop failure. Prior work has found that plant resistance and natural biological control have minimal potential in managing aphids. Insecticides have been recommended in past research to reduce aphid damage but without any 11 guide lines regarding timing of applications or action thresholds. Altering planting time of crops is an important component of pest management for avoidance of pests. This component has not been previously exploited for developing pest management of aphids in canola production systems. Study described in this thesis involves the optimization of planting date and timing of insecticide applications. Canola variety (Shiralee) was planted on mid October, early November and mid November in crop seasons of years 2008-09 and 2009-10 at Multan and Bahawalpur districts of southern Punjab – Pakistan. The experiment design was a split plot with planting dates in main plots and insecticide applications in subplots. In each planting, insects pests including aphids and other hexapods were recorded. Acetamiprid and/ Imidacloprid against aphids were applied at flowering, pod formation, maturity (one spray), flowering and pod formation (two sprays), flowering, pod formation (three sprays) and maturity and pod and maturity (two sprays) stage of the crop. Untreated plots were also maintained as treatment. Aphids were recorded from top 10cm of central shoot of five randomly selected plants from each treatment while other hexapods from the whole five plants per plot. At crop harvest yield and yield contributing components and seed oil contents were recorded. Cabbage aphid, Brevicoryne brassicae Linnaeus (Hemiptera: Aphididae); turnip aphid, Lipaphis erysimi (Kaltenbach) (Hemiptera: Aphididae) were recorded as major/abundant among all other insect pests. Low and negligible populations of peach aphid, Myzus persicae Sulzer, (Hemiptera: Aphididae); whitefly, Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae); and armyworm, Spodoptera exigua (Hübner) (Lepidoptera: Noctuidae) were observed for short duration in early vegetative stages of seedling to rosette of the crop. However, B. brassicae, L. erysimi, and pod borer, Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae) appeared with the onset of flowering to pod stages, respectively. Crop sown in mid October got more aphid free days (105) than crops sown on early November (98 days) and mid November (72 days). At that time of aphid’s infestation, early November sown crop had 28% plants at flowering and 72% plants at bolting stages. While mid November sown crop was 25% at flowering and 75% at bolting stages. In contrast, early sown crop (mid October) had completed almost 94% flowering and 6% of pods setting before aphid invasion. Thus, mid October sown crop escaped the aphid damage at flowering to early pod setting stage. 12 Crop sown on mid October gave significantly higher yield compared to late sown crops. Timing of aphid infestation was noted as important as severity of infestation. Both flowering and pod stages were more vulnerable to damage (yield loss) by aphids pests. These stages proved to be critical for yield-aphid relationship and ultimately for applying insecticides to manage aphids as compared to maturity stage. Frequency of insecticide applications: flowering-pod-maturity stages (with 3 applications) and flowering-pod (with 2 applications) gave higher crop yields than untreated plots and were statistically at par with treatment of single application at flowering stage for three experiments of first two planting dates at both the locations. Insecticides applications at pod and maturity stages did not increase in yield if crop was not treated at flowering stage. Thus application of insecticides at flowering and pod formation stage is an action threshold based upon crop phenology. Insecticides applications (flowering-pod-maturity) for aphids increased around 44% grain yield than no insecticides. Reduction of aphids due to insecticides increased plant height, pods per plant, numbers of seeds per pod and 1000 seed weight (with substantially more for early plantings) but did not affect oil contents of seeds in all the experiments. Cost benefit ratio of these applications was 1:7.12, 1:3.37 and 1:1.90 for early, mid and late planting time, respectively. Integrating early planting at mid October and insecticide applications at flowering and pod stage, economic losses of the pest can be avoided with an increase in income for the growers. Moreover, manipulating early planting dates and timing of insecticide applications/action thresholds can result in more cost effective and environment friendly management program. Keywords: Canola; Brassica napus; sowing dates; Insect pests; growth stages; insecticides; aphid; yield; yield components; southern Punjab; Pakistan.