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Identification of miRNAs regulated gene expression in liver cancer

Thesis Info

Author

Sidra Tufail

Supervisor

Naila Malkani

Department

Zoology Department

Program

Mphill in Zoology

Institute

Government College University

Institute Type

Public

City

Lahore

Province

Punjab

Country

Pakistan

Degree Starting Year

2019

Degree End Year

2021

Viva Year

2021

Thesis Completing Year

2021

Thesis Completion Status

Completed

Page

50

Subject

Zoology

Language

English

Added

2024-04-26 12:31:46

Modified

2024-04-28 13:33:54

ARI ID

1714293234363

Similar


Background: Liver cancer starts in the liver and often develops in the context of cirrhosis and chronic liver disease. For early diagnosis identification of biomarkers is necessary. Aim: To elucidate the miRNA-based mechanism of liver cancer and to identify potential biomarkers to predict liver cancer. Methods: Comprehensive bioinformatics analysis was performed on two GEO datasets “GSE20077” and “GSE164760”. DIANA Tool-mir path v.3, STRING, Cytoscape 3.6.0, Enrichr and Tarbase v8 were used for the identification and analysis of miRNAs and their targets in liver cancer. Results: Four miRNAs; hsa-miR-200b-3p, hsa-miR-130a-3p, and hsa-miR-122-5p and has-miR-122-5p were identified in the current study. These miRNAs were differentially regulated in liver cancer. Further bioinformatics analysis identified KRAS regulated by has-miR-200-3p, CDKN1A regulated by has-miR-1301-3p, TP53 regulated by has-miR-122-5p and CDK6 regulated by has-miR-10-5p. Conclusion: This study identified a set of miRNAs which should be studied further to confirm experimentally as biomarkers.
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