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Home > Molecular Characterization of Gene Abca1 Associated With Type 2 Diabetes

Molecular Characterization of Gene Abca1 Associated With Type 2 Diabetes

Thesis Info

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Author

Aleem Ahmed

Institute

Virtual University of Pakistan

Institute Type

Public

City

Lahore

Province

Punjab

Country

Pakistan

Thesis Completing Year

2018

Thesis Completion Status

Completed

Subject

Software Engineering

Language

English

Link

http://vspace.vu.edu.pk/detail.aspx?id=154

Added

2021-02-17 19:49:13

Modified

2024-03-24 20:25:49

ARI ID

1676720980739

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Diabetes Mellitus also known as hyperglycemia is a chronic metabolic disorder that is mainly characterized by a rise in the plasma glucose levels above the normal range, glucose intolerance and insulin resistance. There are various subtypes of diabetes mellitus of which type 2 diabetes mellitus (type 2 DM) previously also termed as non-insulin- dependent diabetes is the most prevalent form. World Health Organization (WHO) reports that 9% of the world population suffered from diabetes in 2014 of which 90% had type 2 DM (WHO, 2014).More alarming is the fact that by 2030, type 2 DM will be the 7th major cause of death worldwide. Both genetic and environmental factors result in type 2 DM.The prominent risk factors responsible for the disease include; obesity, excess body fat, high blood pressure, sedentary life style, age, poor dietary habits with high intake of sugar, smoking, high consumption of alcohol, socio-economic factors, ethnicity and stress. Mutations in the Adenosine Binding Cassette Transporter Proteins Subfamily A Member 1 (ABCA1) have been associated with abnormal lipid levels and certain variants have been linked with type 2 DM.The present study analyzed the association of ABCA1 rs2230808 gene polymorphism with type 2 DM patients in a local population. The study was carried on 94 subjects who were divided into 49 normal (control) and 45 type 2 DM patients. Genotyping of ABCA1 rs2230808 polymorphism was done through tetra- primers Amplification Refractory Mutation System Polymerase Chain Reaction (ARMS- PCR) technique. The rs2230808 genotypes in the type 2 DM patients was found to be CC (53.33%), CT (31.11%) and TT (15.55%), while in the control group was found to be CC (46.93%), CT (38.77%) and TT (14.28%). The frequency of C and T allele in type 2 DM patients was observed 0.689 and 0.31 respectively, while the allele frequency of C and T allele in control group was found to be 0.663 and 0.337 respectively. The p-value for genotypes and allelic frequency was greater than 0.05. Hence, the results indicate no significant association of ABCA1 rs2230808 polymorphism with risk for type 2 DM was observed in our study group. Additionally, association of CACNA1C rs2239127 gene polymorphism with type 2 DM was also studied. The subjects were divided into 94 type 2 DM patients and 56 normal samples. Restriction Fragment Length Polymorphism technique was employed here. The rs2239127 genotypes in type 2 DM patients was observed as TT (54.25%), CT (34.04%) and CC(11.70%), while in control group it was found to be TT(53.57%), CT (37.5%) and CC (8.92%). The p-value for both genotype and allelic frequency was found to be greater than 0.05% which shows no significant association of rs2239127 polymorphism with type 2 DM in our study group.
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۔نسیم حجازی ۔۔۔۔تحریکِ پاکستان کا عملی کردار

 نسیم حجازی ۔۔۔۔تحریکِ پاکستان کا عملی کردار

عذرا پروین پی ایچ ڈی اسکالر

ناردرن یونیورسٹی، خیبرپختونخواہ

نسیم حجازی کا اصلی نام محمد شریف اور قلمی نام نسیم حجازی تھا ۔ نسیم حجازی ۱۹ مئی ۱۹۱۴ء کو پنجاب کے ایک گاؤں سوجان پور جو کہ قصبہ دھاڑیوال ضلع گورداس پور میں واقع ہے ، میں پیدا ہوئے۔ ۱۹۴۷ء میں تقسیمِ ہند کے بعد ہجرت کر کے پاکستان آ گئے اور مستقلاً یہیں رہائش اختیار کی ۔ زندگی کی ڈور ٹوٹنے تک آپ نے پاکستان سے اپنا ناتا نہیں توڑا۔بالآخر مارچ ۱۹۹۶ء کو اپنے خالقِ حقیقی سے جا ملے ۔ آپ کے آباؤاجداد حجاز سے ہندوستان میں وارد ہوئے اور اپنی رہائش کے لیے انھوں نے پنجاب کے ضلع گورداس پور کا انتخاب کیا ۔ نسیم حجازی کے والد کا نام چودھری جان محمد تھا جو کہ محکمہ انہار میں ملازم تھے ۔بچپن کے ابتدائی دور میں ہی آپ کی والدہ محترمہ داغِ مفارقت دے گئیں تو بارِ تربیت والد صاحب کے سر آن پڑا ۔ ابتدائی تعلیم سوجان پور ہی میں حاصل کرنے کے بعد ۱۹۳۸ء میں ماسٹرز کی ڈگری اسلامیہ کالج لاہور سے حاصل کی ۔ اسی دوران آپ نے چھوٹے موٹے موضوعات پر قلم آزمائی شروع کر دی ۔ افسانہ نگاری میں قدم رکھتے ہوئے نسیم حجازی نے اپنا پہلا افسانہ ‘‘شادر’’ تخلیق کیا ۔ اپنی ادبی زندگی کے ابتدائی دور میں وہ اپنے قلمی نام کی جگہ بھی اپنا اصلی نام ہی استعمال کرتے تھے لیکن بعد میں جب ان کے استادِ محرم نے انھیں مشورہ دیا کہ اپنے لیے الگ قلمی نام کا انتخاب کریں تو انھوں نے اپنے قلمی نام کے لیے حجازِ مقدس سےاپنی نسبت کوافضل جانا اوراپنے لیے نسیم حجازی کے قلمی نام کا انتخاب کیا...

THE RELATIONSHIP BETWEEN SOCIAL NETWORK SITES AND SOCIAL ANXIETY AMONG UNIVERSITI PUTRA MALAYSIA UNDERGRADUATE STUDENTS.

The study explore the relationship between social media communication and social anxiety among undergraduate students. The respondents were selected using a simple random technique. The data was collected by self-administered interview among 100 undergraduate students in Universiti Putra Malaysia. The Instruments used for data collection includes; Social Anxiety Questionnaire for Adults (SAQ-A30) and The Internet Addiction Test (IAT). Study revealed that Facebook was the most common social media patronized with 36 (36.70%) patronage, followed by Instagram with 33 (33.70%), WhatsApp 19 (19.40%) and finally Twitter with 10 (10.20%). Based on the respondents, most students use the social media for social communications and seeking information. The level of social anxiety among most undergraduate students of Human Ecology faculty in Universiti Putra Malaysia is high because approximately two third of the respondents possessed the higher score in social anxiety level. This implies that most undergraduate students of Universiti Putra Malaysia are up to date in information gathering and the use of social network has helped to facilitate social interaction among fellow students and friends thereby reducing the likelihood of students suffering social anxiety disorder.

Evaluation of Synthetic Epsps Gene in Genetically Transformed Plants

Codon optimized synthetic epsps gene was used to develop transgenic tobacco and sugarcane lines using Agrobacterium and biolistic approach, respectively. Putative transgenic tobacco lines analyzed by qRT-PCR showed variable mRNA transcript levels. Southern hybridization performed for determining gene integration patterns showed multiple copy inserts (1-4) of transgene in various tested lines. Immunoblot strips confirmed the translation of cp4-epsps mRNA transcripts in T1 line. Malachite green assay showed variable EPSPS activity levels in various lines in response to glyphosate application. Transgenic tobacco lines exposed to 1% (v/v) glyphosate at 4 to 5 leaf stage showed variable resistance levels ranging from moderate level tolerance to high tolerance. The cp4-epsps mRNA transcript levels varied from genotype to genotype in tested transgenic sugarcane lines regardless of the integration of multiple copy number (3-6) of transgene. Genetic transformation with pyramided constructs results in the integration of multiple genes at a single locus, which is desirable in terms of expression efficiency of transgenes. The cp4-epsps gene was pyramided with insect resistant cry1Ac and cry2Ab genes and cloned in pSb187 vector was used to genetically transform tobacco using Agrobacterium mediated approach. Transgenic lines were confirmed through PCR using gene specific primers of respective genes. The mRNA transcript level of cp4-epsps gene detected through qRT-PCR using GAPDH gene as an internal control was found to be variable among different transgenic lines. Transgenic lines were tested for checking the translational efficiency of all three genes using immunoblot strips. Transgenic tobacco lines found expressing all three proteins were subjected to detached leaf insect bioassays to evaluate the effectiveness of Bt genes in putative transgenic tobacco against insect attack using first instar larvae from Spodoptera littura and Helicoverpa armigera. Transgenic tobacco found to be resistant against these insects showed that cry1Ac and cry2Ab genes were efficient enough in pyramided form. When these transgenic tobacco lines were exposed to glyphosate at 10 to 12 leaf stage, chlorotic symptoms were observed which hinted that herbicide tolerance potential of transgene declined with increasing age of the plants. In order to overcome the spatio temporal gene expression issues, a dual copy epsps expression cassette synthesized under different regulatory elements, cloned in pGreen0029 binary vector was used to generate transgenic tobacco. These tobacco lines exhibited excellent resistance against 19% (v/v) glyphosate at 10-12 leaf stage. This construct has shown tremendous potential regarding transgene expression levels which is required in the field crops. This dual cassette cp4-epsps gene has been recommended for generation of glyphosate resistant cotton and other commercially important cultivars.