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Home > Expression of Glycoside Hydrolases Family 13 Gene from Thermotoga Species into E. Coli and Characterization of the Recombinant Enzyme

Expression of Glycoside Hydrolases Family 13 Gene from Thermotoga Species into E. Coli and Characterization of the Recombinant Enzyme

Thesis Info

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Author

Zafar, Asma

Program

PhD

Institute

Government College University Lahore

City

Lahore

Province

Punjab

Country

Pakistan

Thesis Completing Year

2013

Thesis Completion Status

Completed

Subject

Applied Sciences

Language

English

Link

http://prr.hec.gov.pk/jspui/bitstream/123456789/7975/1/Asma%20zafar%20Final%20thesis.pdf

Added

2021-02-17 19:49:13

Modified

2024-03-24 20:25:49

ARI ID

1676726171262

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The present study was carried out to clone a glycoside hydrolase GH 13 family enzyme from Thermotoga petrophila into Escherichia coli and characterization of the recombinant enzyme. After amplification of the GH 13 family gene of Thermotoga petrophila, it was cloned in E. coli DH5α by using pTZ57R/T as a cloning vector. Screening of positive clones was performed by colony PCR, double digestion of recombinant pTZ57R/T containing GH 13 family gene with NdeI and HindIII as well as by sequencing of cloned gene. Expression of GH 13 family gene was checked in E. coli BL21 (DE3) by using pET 21a (+) as an expression vector. The growth conditions i.e temperature, pH, effect of IPTG and time of induction and optical density of culture at the time of induction were optimized for maximum expression of GH 13 family gene. Various other fermentation parameters like size of inoculum, agitation rate, effect of different media, aeration rate and dissolved oxygen were also studied for maximum expression of cloned gene. Purification of the recombinant GH 13 family enzyme was carried out by heat treatment followed by ion exchange chromatography with 34.6-fold purification having specific activity of 126.31 U mg−1 and a recovery of 56.25 %. Molecular weight of the purified GH 13 family enzyme, 70 kDa, was determined by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). The enzyme was stable at 100 °C temperature and at pH of 7.0. The enzyme activity was increased in the presence of metal ions especially Ca+2 and decreased in the presence of EDTA indicating that the α-amylase was a metalloenzyme. However, the addition of 1 % Tween 20, Tween 80 and β-mercaptoethanol constrained the enzyme activity to 87, 96 and 89 %, respectively. No considerable effect of the organic solvents (ethanol, methanol, isopropanol, acetone and n-butanol) was observed on enzyme activity. Line-weaver Burk plot showed Km and Vmax values of 12.35 mM and 25.839 U/ml/min, respectively. Thermodynamic parameters for hydrolysis of soluble starch were found to be Ea=28.445 KJ/mol, ΔH= 34.12 KJ/mol, ΔS= -6.7 KJ/mol and Q10=0.47. Conserved domain analysis of GH13 family protein showed that it it comprises of three conserved domian: AmyAc_MTase (maltosyltransferase), domain of unknown function and AmyA (glycosidase). Homology modelling of GH13 family gene was carried out using 2 templates 1gjuA and 4gkl.1. Enzyme-substrate docking of GH 13 family enzyme was carried out by using maltotriose and dextrin as substrates. 76% desizing of cotton cloth with purified recombinant GH13 family enzyme was achieved at optimized conditions (with 150U/ml enzyme in a buffer of pH 7.0 at 80ºC after 60 min of incubation). In the light of all results obtained in this study it is concluded that this recombinant GH13 family enzyme could be used as beneficial candidate for textile industry.
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ڈاکٹر عبدالستار صدیقی

ڈاکٹر عبدالستار صدیقی
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Assessment of Interfaith Harmony Between Muslims and Hindus in Socio-Cultural Activities in Swat

This research work investigated the interfaith harmony and social cohesion between two different religious followers of Hinduism and Islam in District Swat of Pakistan. The current world is facing various kinds of issues and challenges regarding interfaith harmony, peace and social cohesion. This is need of the time to establish a peaceful and harmonised day to day life standard for all the segments of society. This research was an effort to analyse the willingness among the Hindus and Muslims for enhancing their tolerance towards each other’s social and cultural activities. It also aimed to highlight the positive approach of the respondents towards the participation in the socio-cultural activities of each other. The results of association of social cohesion showed nonsignificant relationship with an opinion that Hindu and Muslim communities should take part in socio-cultural activities particularly the sports. Similarly, non-significant relationship was found based respondents’ data with an opinion that relations between Hindus and Muslims shall enhanced through participation in cultural and religious ceremonies. The result further concluded that there was peaceful and harmonised environment between Hindus and Muslims being living in the target area. The minorities were fully enjoying freedom and equality in District Swat. Based on the findings of the study, positive social interaction, mutual respect, positivity in thinking and positive role of local media have been recommended as policy guidelines for promoting inter-faith harmony.

سیرت نبی صلی اللہ علیہ وسلم کی عصری اور بین الاقوامی اہمیت،اقوام متحدہ کے حقوق انسانی کے منشور کے تناظر میں ایک تحقیقی مطالعہ

The Biography or Seerah of Prophet Mohammad is a glorious title of history and it has given humanity an unmatched and everlasting status. and a destiny. To prove its honesty and truth, one should not go far in quest or search or to put any efforts. We will know after having a glance at every section that, this alone is the biggest Since the discussed topic is related to focused by me. In this context, following five chapters has been formatted: First chapter: in this chapter, the significance, utility and sources of Seerat-e-Tayyaba has been discussed. Keeping in mind the lexical and idiomatic annotations, it has been told that Seerat is a combination of two different meanings. Comm In view of common meanings, it has been written that the actions and way of life of any common men is called Seerah, but in specific meanings, it has been described as the Plans, Acts, Personality is belonged to Prophet Muhammad, is Called Seerah. 2nd Chapter: Need and importance of modern understandings of Seerat-e-Nabi has been explained. An effort has been made to bring constructive aspects and current issues into practice. In this chapter the aspects/attributes of Holy Prophet and principles of present time has also been expressed. For the relevancy to the topic, and in intention to certain attributes of Prophet Muhammad, Modern understandings of Seerah have been explained and three separate topics have been discussed. 4th Chapter: in this chapter, human rights in specific view of Seerat-un-Nabi have been explained. The clauses of Last Sermon have been explained in view of recent times. 5th Chapter: in this chapter, an effort has been made to solve current issues in the light of Seerat-e-Tayyaba. The comprehensive and universal strategies and teachings of Seerat-e-Tayyaba have been applied in view of current scenario. Also considering the Seerah of Prophet Muhammad as a role model for all, some aspects has also been mentioned.